Commit decff7b4c13939e5f00d51aea4176fc543d73ede

Russell Belfer 2012-07-18T14:30:15

New submodule test data

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diff --git a/tests-clar/resources/submod2/.gitted/HEAD b/tests-clar/resources/submod2/.gitted/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/config b/tests-clar/resources/submod2/.gitted/config
new file mode 100644
index 0000000..abc4207
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/config
@@ -0,0 +1,20 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	ignorecase = true
+[submodule "sm_missing_commits"]
+	url = ../submod2_target
+[submodule "sm_unchanged"]
+	url = ../submod2_target
+[submodule "sm_changed_file"]
+	url = ../submod2_target
+[submodule "sm_changed_index"]
+	url = ../submod2_target
+[submodule "sm_changed_head"]
+	url = ../submod2_target
+[submodule "sm_changed_untracked_file"]
+	url = ../submod2_target
+[submodule "sm_added_and_uncommited"]
+	url = ../submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/description b/tests-clar/resources/submod2/.gitted/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/.gitted/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/.gitted/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/.gitted/index b/tests-clar/resources/submod2/.gitted/index
new file mode 100644
index 0000000..0c17e86
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/index differ
diff --git a/tests-clar/resources/submod2/.gitted/info/exclude b/tests-clar/resources/submod2/.gitted/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/.gitted/logs/HEAD b/tests-clar/resources/submod2/.gitted/logs/HEAD
new file mode 100644
index 0000000..2cf2ca7
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/logs/HEAD
@@ -0,0 +1,4 @@
+0000000000000000000000000000000000000000 14fe9ccf104058df25e0a08361c4494e167ef243 Russell Belfer <rb@github.com> 1342559771 -0700	commit (initial): Initial commit
+14fe9ccf104058df25e0a08361c4494e167ef243 a9104bf89e911387244ef499413960ba472066d9 Russell Belfer <rb@github.com> 1342559831 -0700	commit: Adding a submodule
+a9104bf89e911387244ef499413960ba472066d9 5901da4f1c67756eeadc5121d206bec2431f253b Russell Belfer <rb@github.com> 1342560036 -0700	commit: Updating submodule
+5901da4f1c67756eeadc5121d206bec2431f253b 7484482eb8db738cafa696993664607500a3f2b9 Russell Belfer <rb@github.com> 1342560288 -0700	commit: Adding a bunch more test content
diff --git a/tests-clar/resources/submod2/.gitted/logs/refs/heads/master b/tests-clar/resources/submod2/.gitted/logs/refs/heads/master
new file mode 100644
index 0000000..2cf2ca7
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/logs/refs/heads/master
@@ -0,0 +1,4 @@
+0000000000000000000000000000000000000000 14fe9ccf104058df25e0a08361c4494e167ef243 Russell Belfer <rb@github.com> 1342559771 -0700	commit (initial): Initial commit
+14fe9ccf104058df25e0a08361c4494e167ef243 a9104bf89e911387244ef499413960ba472066d9 Russell Belfer <rb@github.com> 1342559831 -0700	commit: Adding a submodule
+a9104bf89e911387244ef499413960ba472066d9 5901da4f1c67756eeadc5121d206bec2431f253b Russell Belfer <rb@github.com> 1342560036 -0700	commit: Updating submodule
+5901da4f1c67756eeadc5121d206bec2431f253b 7484482eb8db738cafa696993664607500a3f2b9 Russell Belfer <rb@github.com> 1342560288 -0700	commit: Adding a bunch more test content
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/config b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/config
new file mode 100644
index 0000000..2d0583e
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/config
@@ -0,0 +1,13 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	worktree = ../../../sm_added_and_uncommited
+	ignorecase = true
+[remote "origin"]
+	fetch = +refs/heads/*:refs/remotes/origin/*
+	url = /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+[branch "master"]
+	remote = origin
+	merge = refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/description b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/index b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/index
new file mode 100644
index 0000000..65140a5
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/index differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/info/exclude b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/HEAD
new file mode 100644
index 0000000..53753e7
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560316 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/refs/heads/master
new file mode 100644
index 0000000..53753e7
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/refs/heads/master
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560316 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..53753e7
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/logs/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560316 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1
new file mode 100644
index 0000000..f4b7094
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484
new file mode 100644
index 0000000..56c845e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5
new file mode 100644
index 0000000..bd179b5
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/41/bd4bc3df978de695f67ace64c560913da11653 b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/41/bd4bc3df978de695f67ace64c560913da11653
new file mode 100644
index 0000000..ccf49bd
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/41/bd4bc3df978de695f67ace64c560913da11653 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/48/0095882d281ed676fe5b863569520e54a7d5c0
new file mode 100644
index 0000000..5302906
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/5e/4963595a9774b90524d35a807169049de8ccad b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/5e/4963595a9774b90524d35a807169049de8ccad
new file mode 100644
index 0000000..38c791e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/5e/4963595a9774b90524d35a807169049de8ccad differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/6b/31c659545507c381e9cd34ec508f16c04e149e b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
new file mode 100644
index 0000000..a26d299
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
@@ -0,0 +1,2 @@
+x•Q
+!EûvoÅÓy*Ñ_¿í@Çg#h‚£ûOhý^Î9w«¥¤ÒêSoÌ€f1*²ŠÁ[”‰¬§èIc Ô¤ìê¤p£ïµÁkçΑ\›¿¿S߇¿lµÜ@.¤´^QpF‹(æ:ÿúDÿ5Åó“zr~	ñen8
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/73/ba924a80437097795ae839e66e187c55d3babf b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/73/ba924a80437097795ae839e66e187c55d3babf
new file mode 100644
index 0000000..83d1ba4
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/73/ba924a80437097795ae839e66e187c55d3babf differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
new file mode 100644
index 0000000..6d27af8
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
@@ -0,0 +1,2 @@
+x-Ë1Â0FaæžâßØ0pŽÀìÄÐ(N-ÅöÐÛÓ¡Ò“¾é±ãq]>ksÅ*š?	|m“‡Õçiª@ÛÖý¶¼m»¨V£…£'©î`)”.Ø-1¨x
+u„xãòt(+
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/78/9efbdadaa4a582778d4584385495559ea0994b b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/78/9efbdadaa4a582778d4584385495559ea0994b
new file mode 100644
index 0000000..1745884
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/78/9efbdadaa4a582778d4584385495559ea0994b
@@ -0,0 +1,2 @@
+x
α
…0)ÞŠ?=
¥ÉÄNŠlO¤k®¸‹jÛúÿ¹8&„«¨ ãr
”
+ïqJWñ°7¾B<ÉáöfÙìK8­#Q1C-‘"eª·Ì«£Š°ð>¼'@
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e
new file mode 100644
index 0000000..83cc29f
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5
new file mode 100644
index 0000000..55bda40
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/packed-refs b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/packed-refs
new file mode 100644
index 0000000..5a4ebc4
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/packed-refs
@@ -0,0 +1,2 @@
+# pack-refs with: peeled 
+480095882d281ed676fe5b863569520e54a7d5c0 refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/refs/heads/master
new file mode 100644
index 0000000..e12c44d
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/refs/heads/master
@@ -0,0 +1 @@
+480095882d281ed676fe5b863569520e54a7d5c0
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..6efe28f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_added_and_uncommited/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+ref: refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/config b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/config
new file mode 100644
index 0000000..10cc250
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/config
@@ -0,0 +1,13 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	worktree = ../../../sm_changed_file
+	ignorecase = true
+[remote "origin"]
+	fetch = +refs/heads/*:refs/remotes/origin/*
+	url = /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+[branch "master"]
+	remote = origin
+	merge = refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/description b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/index b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/index
new file mode 100644
index 0000000..6914a3b
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/index differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/info/exclude b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/HEAD
new file mode 100644
index 0000000..e5cb63f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560173 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/refs/heads/master
new file mode 100644
index 0000000..e5cb63f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/refs/heads/master
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560173 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..e5cb63f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/logs/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560173 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1
new file mode 100644
index 0000000..f4b7094
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484
new file mode 100644
index 0000000..56c845e
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5
new file mode 100644
index 0000000..bd179b5
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/41/bd4bc3df978de695f67ace64c560913da11653 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/41/bd4bc3df978de695f67ace64c560913da11653
new file mode 100644
index 0000000..ccf49bd
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/41/bd4bc3df978de695f67ace64c560913da11653 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/48/0095882d281ed676fe5b863569520e54a7d5c0
new file mode 100644
index 0000000..5302906
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/5e/4963595a9774b90524d35a807169049de8ccad b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/5e/4963595a9774b90524d35a807169049de8ccad
new file mode 100644
index 0000000..38c791e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/5e/4963595a9774b90524d35a807169049de8ccad differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/6b/31c659545507c381e9cd34ec508f16c04e149e b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
new file mode 100644
index 0000000..a26d299
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
@@ -0,0 +1,2 @@
+x•Q
+!EûvoÅÓy*Ñ_¿í@Çg#h‚£ûOhý^Î9w«¥¤ÒêSoÌ€f1*²ŠÁ[”‰¬§èIc Ô¤ìê¤p£ïµÁkçΑ\›¿¿S߇¿lµÜ@.¤´^QpF‹(æ:ÿúDÿ5Åó“zr~	ñen8
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/73/ba924a80437097795ae839e66e187c55d3babf b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/73/ba924a80437097795ae839e66e187c55d3babf
new file mode 100644
index 0000000..83d1ba4
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/73/ba924a80437097795ae839e66e187c55d3babf differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
new file mode 100644
index 0000000..6d27af8
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
@@ -0,0 +1,2 @@
+x-Ë1Â0FaæžâßØ0pŽÀìÄÐ(N-ÅöÐÛÓ¡Ò“¾é±ãq]>ksÅ*š?	|m“‡Õçiª@ÛÖý¶¼m»¨V£…£'©î`)”.Ø-1¨x
+u„xãòt(+
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/78/9efbdadaa4a582778d4584385495559ea0994b b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/78/9efbdadaa4a582778d4584385495559ea0994b
new file mode 100644
index 0000000..1745884
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/78/9efbdadaa4a582778d4584385495559ea0994b
@@ -0,0 +1,2 @@
+x
α
…0)ÞŠ?=
¥ÉÄNŠlO¤k®¸‹jÛúÿ¹8&„«¨ ãr
”
+ïqJWñ°7¾B<ÉáöfÙìK8­#Q1C-‘"eª·Ì«£Š°ð>¼'@
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e
new file mode 100644
index 0000000..83cc29f
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5
new file mode 100644
index 0000000..55bda40
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/packed-refs b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/packed-refs
new file mode 100644
index 0000000..5a4ebc4
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/packed-refs
@@ -0,0 +1,2 @@
+# pack-refs with: peeled 
+480095882d281ed676fe5b863569520e54a7d5c0 refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/refs/heads/master
new file mode 100644
index 0000000..e12c44d
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/refs/heads/master
@@ -0,0 +1 @@
+480095882d281ed676fe5b863569520e54a7d5c0
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..6efe28f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_file/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+ref: refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/COMMIT_EDITMSG b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/COMMIT_EDITMSG
new file mode 100644
index 0000000..6b8d1e3
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/COMMIT_EDITMSG
@@ -0,0 +1 @@
+Making a change in a submodule
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/config b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/config
new file mode 100644
index 0000000..7d00253
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/config
@@ -0,0 +1,13 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	worktree = ../../../sm_changed_head
+	ignorecase = true
+[remote "origin"]
+	fetch = +refs/heads/*:refs/remotes/origin/*
+	url = /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+[branch "master"]
+	remote = origin
+	merge = refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/description b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/index b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/index
new file mode 100644
index 0000000..728fa29
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/index differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/info/exclude b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/HEAD
new file mode 100644
index 0000000..cabdeb2
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/HEAD
@@ -0,0 +1,2 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560179 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+480095882d281ed676fe5b863569520e54a7d5c0 3d9386c507f6b093471a3e324085657a3c2b4247 Russell Belfer <rb@github.com> 1342560431 -0700	commit: Making a change in a submodule
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/refs/heads/master
new file mode 100644
index 0000000..cabdeb2
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/refs/heads/master
@@ -0,0 +1,2 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560179 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+480095882d281ed676fe5b863569520e54a7d5c0 3d9386c507f6b093471a3e324085657a3c2b4247 Russell Belfer <rb@github.com> 1342560431 -0700	commit: Making a change in a submodule
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..257ca21
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/logs/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560179 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1
new file mode 100644
index 0000000..f4b7094
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484
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index 0000000..56c845e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5
new file mode 100644
index 0000000..bd179b5
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/3d/9386c507f6b093471a3e324085657a3c2b4247 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/3d/9386c507f6b093471a3e324085657a3c2b4247
new file mode 100644
index 0000000..a2c3716
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/3d/9386c507f6b093471a3e324085657a3c2b4247
@@ -0,0 +1,3 @@
+x•ŽKj!E3vµ„jµüÀ#<Þ<“ì@­êéO°uÿq™.çÂ)×ql
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+Ùä™
+ªÔÛzUøî÷-û/Ùg©ð¨ù¹lmíù£\Ç'LÆjrhÍïèÕXG_êŸê+ýlç	ÊšÎE`;ß=÷]ÔÞJç
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/41/bd4bc3df978de695f67ace64c560913da11653 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/41/bd4bc3df978de695f67ace64c560913da11653
new file mode 100644
index 0000000..ccf49bd
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/41/bd4bc3df978de695f67ace64c560913da11653 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/48/0095882d281ed676fe5b863569520e54a7d5c0
new file mode 100644
index 0000000..5302906
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/5e/4963595a9774b90524d35a807169049de8ccad b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/5e/4963595a9774b90524d35a807169049de8ccad
new file mode 100644
index 0000000..38c791e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/5e/4963595a9774b90524d35a807169049de8ccad differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/6b/31c659545507c381e9cd34ec508f16c04e149e b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
new file mode 100644
index 0000000..a26d299
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
@@ -0,0 +1,2 @@
+x•Q
+!EûvoÅÓy*Ñ_¿í@Çg#h‚£ûOhý^Î9w«¥¤ÒêSoÌ€f1*²ŠÁ[”‰¬§èIc Ô¤ìê¤p£ïµÁkçΑ\›¿¿S߇¿lµÜ@.¤´^QpF‹(æ:ÿúDÿ5Åó“zr~	ñen8
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/73/ba924a80437097795ae839e66e187c55d3babf b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/73/ba924a80437097795ae839e66e187c55d3babf
new file mode 100644
index 0000000..83d1ba4
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/73/ba924a80437097795ae839e66e187c55d3babf differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/77/fb0ed3e58568d6ad362c78de08ab8649d76e29 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/77/fb0ed3e58568d6ad362c78de08ab8649d76e29
new file mode 100644
index 0000000..f8a236f
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/77/fb0ed3e58568d6ad362c78de08ab8649d76e29 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
new file mode 100644
index 0000000..6d27af8
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
@@ -0,0 +1,2 @@
+x-Ë1Â0FaæžâßØ0pŽÀìÄÐ(N-ÅöÐÛÓ¡Ò“¾é±ãq]>ksÅ*š?	|m“‡Õçiª@ÛÖý¶¼m»¨V£…£'©î`)”.Ø-1¨x
+u„xãòt(+
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/78/9efbdadaa4a582778d4584385495559ea0994b b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/78/9efbdadaa4a582778d4584385495559ea0994b
new file mode 100644
index 0000000..1745884
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/78/9efbdadaa4a582778d4584385495559ea0994b
@@ -0,0 +1,2 @@
+x
α
…0)ÞŠ?=
¥ÉÄNŠlO¤k®¸‹jÛúÿ¹8&„«¨ ãr
”
+ïqJWñ°7¾B<ÉáöfÙìK8­#Q1C-‘"eª·Ì«£Š°ð>¼'@
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e
new file mode 100644
index 0000000..83cc29f
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/8e/b1e637ed9fc8e5454fa20d38f809091f9395f4 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/8e/b1e637ed9fc8e5454fa20d38f809091f9395f4
new file mode 100644
index 0000000..8155b3e
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/8e/b1e637ed9fc8e5454fa20d38f809091f9395f4
@@ -0,0 +1,2 @@
+xMM;
+1µÎ)Þ	ÁZPÐÞÆr²3kÉl²En¿ƒl!¼æýc±ˆóõrz§Üà ,¹º¡çe +ÚlEZxuPY…x QC³*ðf·uLácfR3ŠÍT0'Ò¯øjƒŠ°ð~G¦^s1Šèb2z’ƒÿùVkî]Ü5<·ûv¨'>ã
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5
new file mode 100644
index 0000000..55bda40
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/packed-refs b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/packed-refs
new file mode 100644
index 0000000..5a4ebc4
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/packed-refs
@@ -0,0 +1,2 @@
+# pack-refs with: peeled 
+480095882d281ed676fe5b863569520e54a7d5c0 refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/refs/heads/master
new file mode 100644
index 0000000..ae079bd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/refs/heads/master
@@ -0,0 +1 @@
+3d9386c507f6b093471a3e324085657a3c2b4247
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..6efe28f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_head/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+ref: refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/config b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/config
new file mode 100644
index 0000000..0274ff7
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/config
@@ -0,0 +1,13 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	worktree = ../../../sm_changed_index
+	ignorecase = true
+[remote "origin"]
+	fetch = +refs/heads/*:refs/remotes/origin/*
+	url = /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+[branch "master"]
+	remote = origin
+	merge = refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/description b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/index b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/index
new file mode 100644
index 0000000..6fad3b4
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/index differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/info/exclude b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/HEAD
new file mode 100644
index 0000000..80eb541
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560175 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/refs/heads/master
new file mode 100644
index 0000000..80eb541
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/refs/heads/master
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560175 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..80eb541
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/logs/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560175 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1
new file mode 100644
index 0000000..f4b7094
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484
new file mode 100644
index 0000000..56c845e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5
new file mode 100644
index 0000000..bd179b5
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/41/bd4bc3df978de695f67ace64c560913da11653 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/41/bd4bc3df978de695f67ace64c560913da11653
new file mode 100644
index 0000000..ccf49bd
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/41/bd4bc3df978de695f67ace64c560913da11653 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/48/0095882d281ed676fe5b863569520e54a7d5c0
new file mode 100644
index 0000000..5302906
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/5e/4963595a9774b90524d35a807169049de8ccad b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/5e/4963595a9774b90524d35a807169049de8ccad
new file mode 100644
index 0000000..38c791e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/5e/4963595a9774b90524d35a807169049de8ccad differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/6b/31c659545507c381e9cd34ec508f16c04e149e b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
new file mode 100644
index 0000000..a26d299
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
@@ -0,0 +1,2 @@
+x•Q
+!EûvoÅÓy*Ñ_¿í@Çg#h‚£ûOhý^Î9w«¥¤ÒêSoÌ€f1*²ŠÁ[”‰¬§èIc Ô¤ìê¤p£ïµÁkçΑ\›¿¿S߇¿lµÜ@.¤´^QpF‹(æ:ÿúDÿ5Åó“zr~	ñen8
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/73/ba924a80437097795ae839e66e187c55d3babf b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/73/ba924a80437097795ae839e66e187c55d3babf
new file mode 100644
index 0000000..83d1ba4
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/73/ba924a80437097795ae839e66e187c55d3babf differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
new file mode 100644
index 0000000..6d27af8
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
@@ -0,0 +1,2 @@
+x-Ë1Â0FaæžâßØ0pŽÀìÄÐ(N-ÅöÐÛÓ¡Ò“¾é±ãq]>ksÅ*š?	|m“‡Õçiª@ÛÖý¶¼m»¨V£…£'©î`)”.Ø-1¨x
+u„xãòt(+
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/78/9efbdadaa4a582778d4584385495559ea0994b b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/78/9efbdadaa4a582778d4584385495559ea0994b
new file mode 100644
index 0000000..1745884
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/78/9efbdadaa4a582778d4584385495559ea0994b
@@ -0,0 +1,2 @@
+x
α
…0)ÞŠ?=
¥ÉÄNŠlO¤k®¸‹jÛúÿ¹8&„«¨ ãr
”
+ïqJWñ°7¾B<ÉáöfÙìK8­#Q1C-‘"eª·Ì«£Š°ð>¼'@
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e
new file mode 100644
index 0000000..83cc29f
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/a0/2d31770687965547ab7a04cee199b29ee458d6 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/a0/2d31770687965547ab7a04cee199b29ee458d6
new file mode 100644
index 0000000..cb3f5a0
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/a0/2d31770687965547ab7a04cee199b29ee458d6 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5
new file mode 100644
index 0000000..55bda40
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/packed-refs b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/packed-refs
new file mode 100644
index 0000000..5a4ebc4
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/packed-refs
@@ -0,0 +1,2 @@
+# pack-refs with: peeled 
+480095882d281ed676fe5b863569520e54a7d5c0 refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/refs/heads/master
new file mode 100644
index 0000000..e12c44d
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/refs/heads/master
@@ -0,0 +1 @@
+480095882d281ed676fe5b863569520e54a7d5c0
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..6efe28f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_index/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+ref: refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/config b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/config
new file mode 100644
index 0000000..7f25844
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/config
@@ -0,0 +1,13 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	worktree = ../../../sm_changed_untracked_file
+	ignorecase = true
+[remote "origin"]
+	fetch = +refs/heads/*:refs/remotes/origin/*
+	url = /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+[branch "master"]
+	remote = origin
+	merge = refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/description b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/index b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/index
new file mode 100644
index 0000000..598e30a
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/index differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/info/exclude b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/HEAD
new file mode 100644
index 0000000..d1beafb
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560186 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/refs/heads/master
new file mode 100644
index 0000000..d1beafb
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/refs/heads/master
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560186 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..d1beafb
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/logs/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560186 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1
new file mode 100644
index 0000000..f4b7094
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484
new file mode 100644
index 0000000..56c845e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5
new file mode 100644
index 0000000..bd179b5
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/41/bd4bc3df978de695f67ace64c560913da11653 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/41/bd4bc3df978de695f67ace64c560913da11653
new file mode 100644
index 0000000..ccf49bd
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/41/bd4bc3df978de695f67ace64c560913da11653 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/48/0095882d281ed676fe5b863569520e54a7d5c0
new file mode 100644
index 0000000..5302906
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/5e/4963595a9774b90524d35a807169049de8ccad b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/5e/4963595a9774b90524d35a807169049de8ccad
new file mode 100644
index 0000000..38c791e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/5e/4963595a9774b90524d35a807169049de8ccad differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/6b/31c659545507c381e9cd34ec508f16c04e149e b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
new file mode 100644
index 0000000..a26d299
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
@@ -0,0 +1,2 @@
+x•Q
+!EûvoÅÓy*Ñ_¿í@Çg#h‚£ûOhý^Î9w«¥¤ÒêSoÌ€f1*²ŠÁ[”‰¬§èIc Ô¤ìê¤p£ïµÁkçΑ\›¿¿S߇¿lµÜ@.¤´^QpF‹(æ:ÿúDÿ5Åó“zr~	ñen8
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/73/ba924a80437097795ae839e66e187c55d3babf b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/73/ba924a80437097795ae839e66e187c55d3babf
new file mode 100644
index 0000000..83d1ba4
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/73/ba924a80437097795ae839e66e187c55d3babf differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
new file mode 100644
index 0000000..6d27af8
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
@@ -0,0 +1,2 @@
+x-Ë1Â0FaæžâßØ0pŽÀìÄÐ(N-ÅöÐÛÓ¡Ò“¾é±ãq]>ksÅ*š?	|m“‡Õçiª@ÛÖý¶¼m»¨V£…£'©î`)”.Ø-1¨x
+u„xãòt(+
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/78/9efbdadaa4a582778d4584385495559ea0994b b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/78/9efbdadaa4a582778d4584385495559ea0994b
new file mode 100644
index 0000000..1745884
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/78/9efbdadaa4a582778d4584385495559ea0994b
@@ -0,0 +1,2 @@
+x
α
…0)ÞŠ?=
¥ÉÄNŠlO¤k®¸‹jÛúÿ¹8&„«¨ ãr
”
+ïqJWñ°7¾B<ÉáöfÙìK8­#Q1C-‘"eª·Ì«£Š°ð>¼'@
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e
new file mode 100644
index 0000000..83cc29f
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5
new file mode 100644
index 0000000..55bda40
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/packed-refs b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/packed-refs
new file mode 100644
index 0000000..5a4ebc4
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/packed-refs
@@ -0,0 +1,2 @@
+# pack-refs with: peeled 
+480095882d281ed676fe5b863569520e54a7d5c0 refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/refs/heads/master
new file mode 100644
index 0000000..e12c44d
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/refs/heads/master
@@ -0,0 +1 @@
+480095882d281ed676fe5b863569520e54a7d5c0
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..6efe28f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_changed_untracked_file/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+ref: refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/config b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/config
new file mode 100644
index 0000000..45fbb30
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/config
@@ -0,0 +1,13 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	worktree = ../../../sm_missing_commits
+	ignorecase = true
+[remote "origin"]
+	fetch = +refs/heads/*:refs/remotes/origin/*
+	url = /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+[branch "master"]
+	remote = origin
+	merge = refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/description b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/index b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/index
new file mode 100644
index 0000000..4903565
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/index differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/info/exclude b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/HEAD
new file mode 100644
index 0000000..ee08c97
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 5e4963595a9774b90524d35a807169049de8ccad Russell Belfer <rb@github.com> 1342559796 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/refs/heads/master
new file mode 100644
index 0000000..ee08c97
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/refs/heads/master
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 5e4963595a9774b90524d35a807169049de8ccad Russell Belfer <rb@github.com> 1342559796 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..ee08c97
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/logs/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 5e4963595a9774b90524d35a807169049de8ccad Russell Belfer <rb@github.com> 1342559796 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1
new file mode 100644
index 0000000..f4b7094
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484
new file mode 100644
index 0000000..56c845e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5
new file mode 100644
index 0000000..bd179b5
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/41/bd4bc3df978de695f67ace64c560913da11653 b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/41/bd4bc3df978de695f67ace64c560913da11653
new file mode 100644
index 0000000..ccf49bd
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/41/bd4bc3df978de695f67ace64c560913da11653 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/5e/4963595a9774b90524d35a807169049de8ccad b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/5e/4963595a9774b90524d35a807169049de8ccad
new file mode 100644
index 0000000..38c791e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/5e/4963595a9774b90524d35a807169049de8ccad differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/6b/31c659545507c381e9cd34ec508f16c04e149e b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
new file mode 100644
index 0000000..a26d299
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
@@ -0,0 +1,2 @@
+x•Q
+!EûvoÅÓy*Ñ_¿í@Çg#h‚£ûOhý^Î9w«¥¤ÒêSoÌ€f1*²ŠÁ[”‰¬§èIc Ô¤ìê¤p£ïµÁkçΑ\›¿¿S߇¿lµÜ@.¤´^QpF‹(æ:ÿúDÿ5Åó“zr~	ñen8
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
new file mode 100644
index 0000000..6d27af8
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
@@ -0,0 +1,2 @@
+x-Ë1Â0FaæžâßØ0pŽÀìÄÐ(N-ÅöÐÛÓ¡Ò“¾é±ãq]>ksÅ*š?	|m“‡Õçiª@ÛÖý¶¼m»¨V£…£'©î`)”.Ø-1¨x
+u„xãòt(+
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e
new file mode 100644
index 0000000..83cc29f
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5
new file mode 100644
index 0000000..55bda40
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/packed-refs b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/packed-refs
new file mode 100644
index 0000000..66fbf5d
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/packed-refs
@@ -0,0 +1,2 @@
+# pack-refs with: peeled 
+5e4963595a9774b90524d35a807169049de8ccad refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/refs/heads/master
new file mode 100644
index 0000000..3913aca
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/refs/heads/master
@@ -0,0 +1 @@
+5e4963595a9774b90524d35a807169049de8ccad
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..6efe28f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_missing_commits/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+ref: refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/config b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/config
new file mode 100644
index 0000000..fc706c9
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/config
@@ -0,0 +1,13 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	worktree = ../../../sm_unchanged
+	ignorecase = true
+[remote "origin"]
+	fetch = +refs/heads/*:refs/remotes/origin/*
+	url = /Users/rb/src/libgit2/tests-clar/resources/submod2_target
+[branch "master"]
+	remote = origin
+	merge = refs/heads/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/description b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/index b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/index
new file mode 100644
index 0000000..629c849
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/index differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/info/exclude b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/HEAD
new file mode 100644
index 0000000..7265328
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560169 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/refs/heads/master
new file mode 100644
index 0000000..7265328
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/refs/heads/master
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560169 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..7265328
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/logs/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342560169 -0700	clone: from /Users/rb/src/libgit2/tests-clar/resources/submod2_target
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1
new file mode 100644
index 0000000..f4b7094
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484
new file mode 100644
index 0000000..56c845e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5
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index 0000000..bd179b5
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/17/d0ece6e96460a06592d9d9d000de37ba4232c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/41/bd4bc3df978de695f67ace64c560913da11653 b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/41/bd4bc3df978de695f67ace64c560913da11653
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index 0000000..ccf49bd
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/41/bd4bc3df978de695f67ace64c560913da11653 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/48/0095882d281ed676fe5b863569520e54a7d5c0
new file mode 100644
index 0000000..5302906
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/48/0095882d281ed676fe5b863569520e54a7d5c0 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/5e/4963595a9774b90524d35a807169049de8ccad b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/5e/4963595a9774b90524d35a807169049de8ccad
new file mode 100644
index 0000000..38c791e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/5e/4963595a9774b90524d35a807169049de8ccad differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/6b/31c659545507c381e9cd34ec508f16c04e149e b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
new file mode 100644
index 0000000..a26d299
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/6b/31c659545507c381e9cd34ec508f16c04e149e
@@ -0,0 +1,2 @@
+x•Q
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/73/ba924a80437097795ae839e66e187c55d3babf b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/73/ba924a80437097795ae839e66e187c55d3babf
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
new file mode 100644
index 0000000..6d27af8
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/78/0d7397f5e8f8f477fb55b7af3accc2154b2d4a
@@ -0,0 +1,2 @@
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+u„xãòt(+
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/78/9efbdadaa4a582778d4584385495559ea0994b b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/78/9efbdadaa4a582778d4584385495559ea0994b
new file mode 100644
index 0000000..1745884
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/78/9efbdadaa4a582778d4584385495559ea0994b
@@ -0,0 +1,2 @@
+x
α
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diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e
new file mode 100644
index 0000000..83cc29f
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/88/34b635dd468a83cb012f6feace968c1c9f5d6e differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5
new file mode 100644
index 0000000..55bda40
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/objects/d0/5f2cd5cc77addf68ed6f50d622c9a4f732e6c5 differ
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/packed-refs b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/packed-refs
new file mode 100644
index 0000000..5a4ebc4
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/packed-refs
@@ -0,0 +1,2 @@
+# pack-refs with: peeled 
+480095882d281ed676fe5b863569520e54a7d5c0 refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/refs/heads/master b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/refs/heads/master
new file mode 100644
index 0000000..e12c44d
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/refs/heads/master
@@ -0,0 +1 @@
+480095882d281ed676fe5b863569520e54a7d5c0
diff --git a/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/refs/remotes/origin/HEAD b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/refs/remotes/origin/HEAD
new file mode 100644
index 0000000..6efe28f
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/modules/sm_unchanged/refs/remotes/origin/HEAD
@@ -0,0 +1 @@
+ref: refs/remotes/origin/master
diff --git a/tests-clar/resources/submod2/.gitted/objects/09/460e5b6cbcb05a3e404593c32a3aa7221eca0e b/tests-clar/resources/submod2/.gitted/objects/09/460e5b6cbcb05a3e404593c32a3aa7221eca0e
new file mode 100644
index 0000000..f1ea5f4
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/objects/09/460e5b6cbcb05a3e404593c32a3aa7221eca0e differ
diff --git a/tests-clar/resources/submod2/.gitted/objects/14/fe9ccf104058df25e0a08361c4494e167ef243 b/tests-clar/resources/submod2/.gitted/objects/14/fe9ccf104058df25e0a08361c4494e167ef243
new file mode 100644
index 0000000..d3c8582
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/objects/14/fe9ccf104058df25e0a08361c4494e167ef243
@@ -0,0 +1 @@
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diff --git a/tests-clar/resources/submod2/.gitted/objects/22/ce3e0311dda73a5992d54a4a595518d3876ea7 b/tests-clar/resources/submod2/.gitted/objects/22/ce3e0311dda73a5992d54a4a595518d3876ea7
new file mode 100644
index 0000000..fce6a94
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/objects/22/ce3e0311dda73a5992d54a4a595518d3876ea7
@@ -0,0 +1,4 @@
+xµË
+Â0Eݶ_Qº·.
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index 0000000..2965bec
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--- /dev/null
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new file mode 100644
index 0000000..160f1ca
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/objects/97/4cf7c73de336b0c4e019f918f3cee367d72e84
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\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/objects/9d/bc299bc013ea253583b40bf327b5a6e4037b89 b/tests-clar/resources/submod2/.gitted/objects/9d/bc299bc013ea253583b40bf327b5a6e4037b89
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index 0000000..1ee5221
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index 0000000..2239e14
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/objects/a9/104bf89e911387244ef499413960ba472066d9 differ
diff --git a/tests-clar/resources/submod2/.gitted/objects/b6/14088620bbdc1d29549d223ceba0f4419fd4cb b/tests-clar/resources/submod2/.gitted/objects/b6/14088620bbdc1d29549d223ceba0f4419fd4cb
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index 0000000..a03ea66
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/objects/b6/14088620bbdc1d29549d223ceba0f4419fd4cb differ
diff --git a/tests-clar/resources/submod2/.gitted/objects/d4/07f19e50c1da1ff584beafe0d6dac7237c5d06 b/tests-clar/resources/submod2/.gitted/objects/d4/07f19e50c1da1ff584beafe0d6dac7237c5d06
new file mode 100644
index 0000000..292303e
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/objects/d4/07f19e50c1da1ff584beafe0d6dac7237c5d06 differ
diff --git a/tests-clar/resources/submod2/.gitted/objects/d9/3e95571d92cceb5de28c205f1d5f3cc8b88bc8 b/tests-clar/resources/submod2/.gitted/objects/d9/3e95571d92cceb5de28c205f1d5f3cc8b88bc8
new file mode 100644
index 0000000..b92c7ee
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/objects/d9/3e95571d92cceb5de28c205f1d5f3cc8b88bc8
@@ -0,0 +1,2 @@
+x•ÏÛ
+!€ánק}€
"‚.z’uRÉCx€}üΑۼøt¸
œ.׫Ù6î‚,iŸs&%ãÁ9“S¿#ݲ¦úIW¢=—a˜ßËf2A‹¼BYsÏñßÐa{c±¶^K3g¼Äñ³wMÍ F˜Üúøߥ4sÅçâ€òÇáõÎ÷'Nê°I
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/objects/e3/b83bf274ee065eee48734cf8c6dfaf5e81471c b/tests-clar/resources/submod2/.gitted/objects/e3/b83bf274ee065eee48734cf8c6dfaf5e81471c
new file mode 100644
index 0000000..3c7750b
Binary files /dev/null and b/tests-clar/resources/submod2/.gitted/objects/e3/b83bf274ee065eee48734cf8c6dfaf5e81471c differ
diff --git a/tests-clar/resources/submod2/.gitted/objects/f5/4414c25e6d24fe39f5c3f128d7c8a17bc23833 b/tests-clar/resources/submod2/.gitted/objects/f5/4414c25e6d24fe39f5c3f128d7c8a17bc23833
new file mode 100644
index 0000000..219620b
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/objects/f5/4414c25e6d24fe39f5c3f128d7c8a17bc23833
@@ -0,0 +1,2 @@
+xeÍÁ
+Â0„a¯íS„ÞíbOzð1<I	Iº¤¤‘Íû+ˆ‚õ:?|ãsõæt9îh¾Ô¥e6Š-	H[´¡–’ÃÜw§«¹šÿØwMò«Œ#½‘ɪ“ÈÚïж…Õm‘—_î; º$ž rò1éDÊPCvB¨Mcø‡ýI^
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/objects/f9/90a25a74d1a8281ce2ab018ea8df66795cd60b b/tests-clar/resources/submod2/.gitted/objects/f9/90a25a74d1a8281ce2ab018ea8df66795cd60b
new file mode 100644
index 0000000..883a40b
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/objects/f9/90a25a74d1a8281ce2ab018ea8df66795cd60b
@@ -0,0 +1 @@
+xEŒA€ =óŠý„ÿáZ)¤RE¿/ñb2·É«1¶uÙsé˜xôÁ§Å¡—îˆä>ßä2<E™nG=2,ýÉœTÄ’’4©Žî4!¼N¬$`
\ No newline at end of file
diff --git a/tests-clar/resources/submod2/.gitted/refs/heads/master b/tests-clar/resources/submod2/.gitted/refs/heads/master
new file mode 100644
index 0000000..d1d38aa
--- /dev/null
+++ b/tests-clar/resources/submod2/.gitted/refs/heads/master
@@ -0,0 +1 @@
+7484482eb8db738cafa696993664607500a3f2b9
diff --git a/tests-clar/resources/submod2/README.txt b/tests-clar/resources/submod2/README.txt
new file mode 100644
index 0000000..f990a25
--- /dev/null
+++ b/tests-clar/resources/submod2/README.txt
@@ -0,0 +1,3 @@
+This is the submodule test data
+This repo will have a bunch of submodules in different states
+
diff --git a/tests-clar/resources/submod2/gitmodules b/tests-clar/resources/submod2/gitmodules
new file mode 100644
index 0000000..7b150b1
--- /dev/null
+++ b/tests-clar/resources/submod2/gitmodules
@@ -0,0 +1,21 @@
+[submodule "sm_missing_commits"]
+	path = sm_missing_commits
+	url = ../submod2_target
+[submodule "sm_unchanged"]
+	path = sm_unchanged
+	url = ../submod2_target
+[submodule "sm_changed_file"]
+	path = sm_changed_file
+	url = ../submod2_target
+[submodule "sm_changed_index"]
+	path = sm_changed_index
+	url = ../submod2_target
+[submodule "sm_changed_head"]
+	path = sm_changed_head
+	url = ../submod2_target
+[submodule "sm_changed_untracked_file"]
+	path = sm_changed_untracked_file
+	url = ../submod2_target
+[submodule "sm_added_and_uncommited"]
+	path = sm_added_and_uncommited
+	url = ../submod2_target
diff --git a/tests-clar/resources/submod2/just_a_dir/contents b/tests-clar/resources/submod2/just_a_dir/contents
new file mode 100644
index 0000000..7ba4c5c
--- /dev/null
+++ b/tests-clar/resources/submod2/just_a_dir/contents
@@ -0,0 +1 @@
+This is a file in a plain directory
diff --git a/tests-clar/resources/submod2/just_a_file b/tests-clar/resources/submod2/just_a_file
new file mode 100644
index 0000000..42cfb95
--- /dev/null
+++ b/tests-clar/resources/submod2/just_a_file
@@ -0,0 +1 @@
+This is just a plain file
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/COMMIT_EDITMSG b/tests-clar/resources/submod2/not_submodule/.gitted/COMMIT_EDITMSG
new file mode 100644
index 0000000..5852f44
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/COMMIT_EDITMSG
@@ -0,0 +1 @@
+Initial commit
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/HEAD b/tests-clar/resources/submod2/not_submodule/.gitted/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/config b/tests-clar/resources/submod2/not_submodule/.gitted/config
new file mode 100644
index 0000000..af10792
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/config
@@ -0,0 +1,6 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	ignorecase = true
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/description b/tests-clar/resources/submod2/not_submodule/.gitted/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/hooks/applypatch-msg.sample b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/hooks/commit-msg.sample b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/commit-msg.sample
new file mode 100755
index 0000000..b58d118
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/commit-msg.sample
@@ -0,0 +1,24 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message.
+# Called by "git commit" with one argument, the name of the file
+# that has the commit message.  The hook should exit with non-zero
+# status after issuing an appropriate message if it wants to stop the
+# commit.  The hook is allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "commit-msg".
+
+# Uncomment the below to add a Signed-off-by line to the message.
+# Doing this in a hook is a bad idea in general, but the prepare-commit-msg
+# hook is more suited to it.
+#
+# SOB=$(git var GIT_AUTHOR_IDENT | sed -n 's/^\(.*>\).*$/Signed-off-by: \1/p')
+# grep -qs "^$SOB" "$1" || echo "$SOB" >> "$1"
+
+# This example catches duplicate Signed-off-by lines.
+
+test "" = "$(grep '^Signed-off-by: ' "$1" |
+	 sort | uniq -c | sed -e '/^[ 	]*1[ 	]/d')" || {
+	echo >&2 Duplicate Signed-off-by lines.
+	exit 1
+}
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/hooks/post-update.sample b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/post-update.sample
new file mode 100755
index 0000000..ec17ec1
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/post-update.sample
@@ -0,0 +1,8 @@
+#!/bin/sh
+#
+# An example hook script to prepare a packed repository for use over
+# dumb transports.
+#
+# To enable this hook, rename this file to "post-update".
+
+exec git update-server-info
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-applypatch.sample b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-applypatch.sample
new file mode 100755
index 0000000..b1f187c
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-applypatch.sample
@@ -0,0 +1,14 @@
+#!/bin/sh
+#
+# An example hook script to verify what is about to be committed
+# by applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.
+#
+# To enable this hook, rename this file to "pre-applypatch".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/pre-commit" &&
+	exec "$GIT_DIR/hooks/pre-commit" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-commit.sample b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-commit.sample
new file mode 100755
index 0000000..18c4829
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-commit.sample
@@ -0,0 +1,50 @@
+#!/bin/sh
+#
+# An example hook script to verify what is about to be committed.
+# Called by "git commit" with no arguments.  The hook should
+# exit with non-zero status after issuing an appropriate message if
+# it wants to stop the commit.
+#
+# To enable this hook, rename this file to "pre-commit".
+
+if git rev-parse --verify HEAD >/dev/null 2>&1
+then
+	against=HEAD
+else
+	# Initial commit: diff against an empty tree object
+	against=4b825dc642cb6eb9a060e54bf8d69288fbee4904
+fi
+
+# If you want to allow non-ascii filenames set this variable to true.
+allownonascii=$(git config hooks.allownonascii)
+
+# Redirect output to stderr.
+exec 1>&2
+
+# Cross platform projects tend to avoid non-ascii filenames; prevent
+# them from being added to the repository. We exploit the fact that the
+# printable range starts at the space character and ends with tilde.
+if [ "$allownonascii" != "true" ] &&
+	# Note that the use of brackets around a tr range is ok here, (it's
+	# even required, for portability to Solaris 10's /usr/bin/tr), since
+	# the square bracket bytes happen to fall in the designated range.
+	test $(git diff --cached --name-only --diff-filter=A -z $against |
+	  LC_ALL=C tr -d '[ -~]\0' | wc -c) != 0
+then
+	echo "Error: Attempt to add a non-ascii file name."
+	echo
+	echo "This can cause problems if you want to work"
+	echo "with people on other platforms."
+	echo
+	echo "To be portable it is advisable to rename the file ..."
+	echo
+	echo "If you know what you are doing you can disable this"
+	echo "check using:"
+	echo
+	echo "  git config hooks.allownonascii true"
+	echo
+	exit 1
+fi
+
+# If there are whitespace errors, print the offending file names and fail.
+exec git diff-index --check --cached $against --
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-rebase.sample b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-rebase.sample
new file mode 100755
index 0000000..9773ed4
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/pre-rebase.sample
@@ -0,0 +1,169 @@
+#!/bin/sh
+#
+# Copyright (c) 2006, 2008 Junio C Hamano
+#
+# The "pre-rebase" hook is run just before "git rebase" starts doing
+# its job, and can prevent the command from running by exiting with
+# non-zero status.
+#
+# The hook is called with the following parameters:
+#
+# $1 -- the upstream the series was forked from.
+# $2 -- the branch being rebased (or empty when rebasing the current branch).
+#
+# This sample shows how to prevent topic branches that are already
+# merged to 'next' branch from getting rebased, because allowing it
+# would result in rebasing already published history.
+
+publish=next
+basebranch="$1"
+if test "$#" = 2
+then
+	topic="refs/heads/$2"
+else
+	topic=`git symbolic-ref HEAD` ||
+	exit 0 ;# we do not interrupt rebasing detached HEAD
+fi
+
+case "$topic" in
+refs/heads/??/*)
+	;;
+*)
+	exit 0 ;# we do not interrupt others.
+	;;
+esac
+
+# Now we are dealing with a topic branch being rebased
+# on top of master.  Is it OK to rebase it?
+
+# Does the topic really exist?
+git show-ref -q "$topic" || {
+	echo >&2 "No such branch $topic"
+	exit 1
+}
+
+# Is topic fully merged to master?
+not_in_master=`git rev-list --pretty=oneline ^master "$topic"`
+if test -z "$not_in_master"
+then
+	echo >&2 "$topic is fully merged to master; better remove it."
+	exit 1 ;# we could allow it, but there is no point.
+fi
+
+# Is topic ever merged to next?  If so you should not be rebasing it.
+only_next_1=`git rev-list ^master "^$topic" ${publish} | sort`
+only_next_2=`git rev-list ^master           ${publish} | sort`
+if test "$only_next_1" = "$only_next_2"
+then
+	not_in_topic=`git rev-list "^$topic" master`
+	if test -z "$not_in_topic"
+	then
+		echo >&2 "$topic is already up-to-date with master"
+		exit 1 ;# we could allow it, but there is no point.
+	else
+		exit 0
+	fi
+else
+	not_in_next=`git rev-list --pretty=oneline ^${publish} "$topic"`
+	/usr/bin/perl -e '
+		my $topic = $ARGV[0];
+		my $msg = "* $topic has commits already merged to public branch:\n";
+		my (%not_in_next) = map {
+			/^([0-9a-f]+) /;
+			($1 => 1);
+		} split(/\n/, $ARGV[1]);
+		for my $elem (map {
+				/^([0-9a-f]+) (.*)$/;
+				[$1 => $2];
+			} split(/\n/, $ARGV[2])) {
+			if (!exists $not_in_next{$elem->[0]}) {
+				if ($msg) {
+					print STDERR $msg;
+					undef $msg;
+				}
+				print STDERR " $elem->[1]\n";
+			}
+		}
+	' "$topic" "$not_in_next" "$not_in_master"
+	exit 1
+fi
+
+exit 0
+
+################################################################
+
+This sample hook safeguards topic branches that have been
+published from being rewound.
+
+The workflow assumed here is:
+
+ * Once a topic branch forks from "master", "master" is never
+   merged into it again (either directly or indirectly).
+
+ * Once a topic branch is fully cooked and merged into "master",
+   it is deleted.  If you need to build on top of it to correct
+   earlier mistakes, a new topic branch is created by forking at
+   the tip of the "master".  This is not strictly necessary, but
+   it makes it easier to keep your history simple.
+
+ * Whenever you need to test or publish your changes to topic
+   branches, merge them into "next" branch.
+
+The script, being an example, hardcodes the publish branch name
+to be "next", but it is trivial to make it configurable via
+$GIT_DIR/config mechanism.
+
+With this workflow, you would want to know:
+
+(1) ... if a topic branch has ever been merged to "next".  Young
+    topic branches can have stupid mistakes you would rather
+    clean up before publishing, and things that have not been
+    merged into other branches can be easily rebased without
+    affecting other people.  But once it is published, you would
+    not want to rewind it.
+
+(2) ... if a topic branch has been fully merged to "master".
+    Then you can delete it.  More importantly, you should not
+    build on top of it -- other people may already want to
+    change things related to the topic as patches against your
+    "master", so if you need further changes, it is better to
+    fork the topic (perhaps with the same name) afresh from the
+    tip of "master".
+
+Let's look at this example:
+
+		   o---o---o---o---o---o---o---o---o---o "next"
+		  /       /           /           /
+		 /   a---a---b A     /           /
+		/   /               /           /
+	       /   /   c---c---c---c B         /
+	      /   /   /             \         /
+	     /   /   /   b---b C     \       /
+	    /   /   /   /             \     /
+    ---o---o---o---o---o---o---o---o---o---o---o "master"
+
+
+A, B and C are topic branches.
+
+ * A has one fix since it was merged up to "next".
+
+ * B has finished.  It has been fully merged up to "master" and "next",
+   and is ready to be deleted.
+
+ * C has not merged to "next" at all.
+
+We would want to allow C to be rebased, refuse A, and encourage
+B to be deleted.
+
+To compute (1):
+
+	git rev-list ^master ^topic next
+	git rev-list ^master        next
+
+	if these match, topic has not merged in next at all.
+
+To compute (2):
+
+	git rev-list master..topic
+
+	if this is empty, it is fully merged to "master".
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/hooks/prepare-commit-msg.sample b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/prepare-commit-msg.sample
new file mode 100755
index 0000000..f093a02
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/prepare-commit-msg.sample
@@ -0,0 +1,36 @@
+#!/bin/sh
+#
+# An example hook script to prepare the commit log message.
+# Called by "git commit" with the name of the file that has the
+# commit message, followed by the description of the commit
+# message's source.  The hook's purpose is to edit the commit
+# message file.  If the hook fails with a non-zero status,
+# the commit is aborted.
+#
+# To enable this hook, rename this file to "prepare-commit-msg".
+
+# This hook includes three examples.  The first comments out the
+# "Conflicts:" part of a merge commit.
+#
+# The second includes the output of "git diff --name-status -r"
+# into the message, just before the "git status" output.  It is
+# commented because it doesn't cope with --amend or with squashed
+# commits.
+#
+# The third example adds a Signed-off-by line to the message, that can
+# still be edited.  This is rarely a good idea.
+
+case "$2,$3" in
+  merge,)
+    /usr/bin/perl -i.bak -ne 's/^/# /, s/^# #/#/ if /^Conflicts/ .. /#/; print' "$1" ;;
+
+# ,|template,)
+#   /usr/bin/perl -i.bak -pe '
+#      print "\n" . `git diff --cached --name-status -r`
+#	 if /^#/ && $first++ == 0' "$1" ;;
+
+  *) ;;
+esac
+
+# SOB=$(git var GIT_AUTHOR_IDENT | sed -n 's/^\(.*>\).*$/Signed-off-by: \1/p')
+# grep -qs "^$SOB" "$1" || echo "$SOB" >> "$1"
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/hooks/update.sample b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/update.sample
new file mode 100755
index 0000000..71ab04e
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/hooks/update.sample
@@ -0,0 +1,128 @@
+#!/bin/sh
+#
+# An example hook script to blocks unannotated tags from entering.
+# Called by "git receive-pack" with arguments: refname sha1-old sha1-new
+#
+# To enable this hook, rename this file to "update".
+#
+# Config
+# ------
+# hooks.allowunannotated
+#   This boolean sets whether unannotated tags will be allowed into the
+#   repository.  By default they won't be.
+# hooks.allowdeletetag
+#   This boolean sets whether deleting tags will be allowed in the
+#   repository.  By default they won't be.
+# hooks.allowmodifytag
+#   This boolean sets whether a tag may be modified after creation. By default
+#   it won't be.
+# hooks.allowdeletebranch
+#   This boolean sets whether deleting branches will be allowed in the
+#   repository.  By default they won't be.
+# hooks.denycreatebranch
+#   This boolean sets whether remotely creating branches will be denied
+#   in the repository.  By default this is allowed.
+#
+
+# --- Command line
+refname="$1"
+oldrev="$2"
+newrev="$3"
+
+# --- Safety check
+if [ -z "$GIT_DIR" ]; then
+	echo "Don't run this script from the command line." >&2
+	echo " (if you want, you could supply GIT_DIR then run" >&2
+	echo "  $0 <ref> <oldrev> <newrev>)" >&2
+	exit 1
+fi
+
+if [ -z "$refname" -o -z "$oldrev" -o -z "$newrev" ]; then
+	echo "Usage: $0 <ref> <oldrev> <newrev>" >&2
+	exit 1
+fi
+
+# --- Config
+allowunannotated=$(git config --bool hooks.allowunannotated)
+allowdeletebranch=$(git config --bool hooks.allowdeletebranch)
+denycreatebranch=$(git config --bool hooks.denycreatebranch)
+allowdeletetag=$(git config --bool hooks.allowdeletetag)
+allowmodifytag=$(git config --bool hooks.allowmodifytag)
+
+# check for no description
+projectdesc=$(sed -e '1q' "$GIT_DIR/description")
+case "$projectdesc" in
+"Unnamed repository"* | "")
+	echo "*** Project description file hasn't been set" >&2
+	exit 1
+	;;
+esac
+
+# --- Check types
+# if $newrev is 0000...0000, it's a commit to delete a ref.
+zero="0000000000000000000000000000000000000000"
+if [ "$newrev" = "$zero" ]; then
+	newrev_type=delete
+else
+	newrev_type=$(git cat-file -t $newrev)
+fi
+
+case "$refname","$newrev_type" in
+	refs/tags/*,commit)
+		# un-annotated tag
+		short_refname=${refname##refs/tags/}
+		if [ "$allowunannotated" != "true" ]; then
+			echo "*** The un-annotated tag, $short_refname, is not allowed in this repository" >&2
+			echo "*** Use 'git tag [ -a | -s ]' for tags you want to propagate." >&2
+			exit 1
+		fi
+		;;
+	refs/tags/*,delete)
+		# delete tag
+		if [ "$allowdeletetag" != "true" ]; then
+			echo "*** Deleting a tag is not allowed in this repository" >&2
+			exit 1
+		fi
+		;;
+	refs/tags/*,tag)
+		# annotated tag
+		if [ "$allowmodifytag" != "true" ] && git rev-parse $refname > /dev/null 2>&1
+		then
+			echo "*** Tag '$refname' already exists." >&2
+			echo "*** Modifying a tag is not allowed in this repository." >&2
+			exit 1
+		fi
+		;;
+	refs/heads/*,commit)
+		# branch
+		if [ "$oldrev" = "$zero" -a "$denycreatebranch" = "true" ]; then
+			echo "*** Creating a branch is not allowed in this repository" >&2
+			exit 1
+		fi
+		;;
+	refs/heads/*,delete)
+		# delete branch
+		if [ "$allowdeletebranch" != "true" ]; then
+			echo "*** Deleting a branch is not allowed in this repository" >&2
+			exit 1
+		fi
+		;;
+	refs/remotes/*,commit)
+		# tracking branch
+		;;
+	refs/remotes/*,delete)
+		# delete tracking branch
+		if [ "$allowdeletebranch" != "true" ]; then
+			echo "*** Deleting a tracking branch is not allowed in this repository" >&2
+			exit 1
+		fi
+		;;
+	*)
+		# Anything else (is there anything else?)
+		echo "*** Update hook: unknown type of update to ref $refname of type $newrev_type" >&2
+		exit 1
+		;;
+esac
+
+# --- Finished
+exit 0
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/index b/tests-clar/resources/submod2/not_submodule/.gitted/index
new file mode 100644
index 0000000..f3fafa5
Binary files /dev/null and b/tests-clar/resources/submod2/not_submodule/.gitted/index differ
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/info/exclude b/tests-clar/resources/submod2/not_submodule/.gitted/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/logs/HEAD b/tests-clar/resources/submod2/not_submodule/.gitted/logs/HEAD
new file mode 100644
index 0000000..1749e7d
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/logs/HEAD
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 68e92c611b80ee1ed8f38314ff9577f0d15b2444 Russell Belfer <rb@github.com> 1342560358 -0700	commit (initial): Initial commit
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/logs/refs/heads/master b/tests-clar/resources/submod2/not_submodule/.gitted/logs/refs/heads/master
new file mode 100644
index 0000000..1749e7d
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/logs/refs/heads/master
@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 68e92c611b80ee1ed8f38314ff9577f0d15b2444 Russell Belfer <rb@github.com> 1342560358 -0700	commit (initial): Initial commit
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/objects/68/e92c611b80ee1ed8f38314ff9577f0d15b2444 b/tests-clar/resources/submod2/not_submodule/.gitted/objects/68/e92c611b80ee1ed8f38314ff9577f0d15b2444
new file mode 100644
index 0000000..8892531
Binary files /dev/null and b/tests-clar/resources/submod2/not_submodule/.gitted/objects/68/e92c611b80ee1ed8f38314ff9577f0d15b2444 differ
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/objects/71/ff9927d7c8a5639e062c38a7d35c433c424627 b/tests-clar/resources/submod2/not_submodule/.gitted/objects/71/ff9927d7c8a5639e062c38a7d35c433c424627
new file mode 100644
index 0000000..c4e1a77
Binary files /dev/null and b/tests-clar/resources/submod2/not_submodule/.gitted/objects/71/ff9927d7c8a5639e062c38a7d35c433c424627 differ
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/objects/f0/1d56b18efd353ef2bb93a4585d590a0847195e b/tests-clar/resources/submod2/not_submodule/.gitted/objects/f0/1d56b18efd353ef2bb93a4585d590a0847195e
new file mode 100644
index 0000000..e9f1942
Binary files /dev/null and b/tests-clar/resources/submod2/not_submodule/.gitted/objects/f0/1d56b18efd353ef2bb93a4585d590a0847195e differ
diff --git a/tests-clar/resources/submod2/not_submodule/.gitted/refs/heads/master b/tests-clar/resources/submod2/not_submodule/.gitted/refs/heads/master
new file mode 100644
index 0000000..0bd8514
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/.gitted/refs/heads/master
@@ -0,0 +1 @@
+68e92c611b80ee1ed8f38314ff9577f0d15b2444
diff --git a/tests-clar/resources/submod2/not_submodule/README.txt b/tests-clar/resources/submod2/not_submodule/README.txt
new file mode 100644
index 0000000..71ff992
--- /dev/null
+++ b/tests-clar/resources/submod2/not_submodule/README.txt
@@ -0,0 +1 @@
+This is a git repo but not a submodule
diff --git a/tests-clar/resources/submod2/sm_added_and_uncommited/.gitted b/tests-clar/resources/submod2/sm_added_and_uncommited/.gitted
new file mode 100644
index 0000000..2b2a4cf
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_added_and_uncommited/.gitted
@@ -0,0 +1 @@
+gitdir: ../.git/modules/sm_added_and_uncommited
diff --git a/tests-clar/resources/submod2/sm_added_and_uncommited/README.txt b/tests-clar/resources/submod2/sm_added_and_uncommited/README.txt
new file mode 100644
index 0000000..780d739
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_added_and_uncommited/README.txt
@@ -0,0 +1,3 @@
+This is the target for submod2 submodule links.
+Don't add commits casually because you make break tests.
+
diff --git a/tests-clar/resources/submod2/sm_added_and_uncommited/file_to_modify b/tests-clar/resources/submod2/sm_added_and_uncommited/file_to_modify
new file mode 100644
index 0000000..789efbd
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_added_and_uncommited/file_to_modify
@@ -0,0 +1,3 @@
+This is a file to modify in submodules
+It already has some history.
+You can add local changes as needed.
diff --git a/tests-clar/resources/submod2/sm_changed_file/.gitted b/tests-clar/resources/submod2/sm_changed_file/.gitted
new file mode 100644
index 0000000..dc98b16
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_file/.gitted
@@ -0,0 +1 @@
+gitdir: ../.git/modules/sm_changed_file
diff --git a/tests-clar/resources/submod2/sm_changed_file/README.txt b/tests-clar/resources/submod2/sm_changed_file/README.txt
new file mode 100644
index 0000000..780d739
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_file/README.txt
@@ -0,0 +1,3 @@
+This is the target for submod2 submodule links.
+Don't add commits casually because you make break tests.
+
diff --git a/tests-clar/resources/submod2/sm_changed_file/file_to_modify b/tests-clar/resources/submod2/sm_changed_file/file_to_modify
new file mode 100644
index 0000000..e5ba671
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_file/file_to_modify
@@ -0,0 +1,4 @@
+This is a file to modify in submodules
+It already has some history.
+You can add local changes as needed.
+In this case, the file is changed in the workdir
diff --git a/tests-clar/resources/submod2/sm_changed_head/.gitted b/tests-clar/resources/submod2/sm_changed_head/.gitted
new file mode 100644
index 0000000..d5419b6
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_head/.gitted
@@ -0,0 +1 @@
+gitdir: ../.git/modules/sm_changed_head
diff --git a/tests-clar/resources/submod2/sm_changed_head/README.txt b/tests-clar/resources/submod2/sm_changed_head/README.txt
new file mode 100644
index 0000000..780d739
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_head/README.txt
@@ -0,0 +1,3 @@
+This is the target for submod2 submodule links.
+Don't add commits casually because you make break tests.
+
diff --git a/tests-clar/resources/submod2/sm_changed_head/file_to_modify b/tests-clar/resources/submod2/sm_changed_head/file_to_modify
new file mode 100644
index 0000000..8eb1e63
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_head/file_to_modify
@@ -0,0 +1,4 @@
+This is a file to modify in submodules
+It already has some history.
+You can add local changes as needed.
+This one has been changed and the change has been committed to HEAD.
diff --git a/tests-clar/resources/submod2/sm_changed_index/.gitted b/tests-clar/resources/submod2/sm_changed_index/.gitted
new file mode 100644
index 0000000..2c7a5b2
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_index/.gitted
@@ -0,0 +1 @@
+gitdir: ../.git/modules/sm_changed_index
diff --git a/tests-clar/resources/submod2/sm_changed_index/README.txt b/tests-clar/resources/submod2/sm_changed_index/README.txt
new file mode 100644
index 0000000..780d739
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_index/README.txt
@@ -0,0 +1,3 @@
+This is the target for submod2 submodule links.
+Don't add commits casually because you make break tests.
+
diff --git a/tests-clar/resources/submod2/sm_changed_index/file_to_modify b/tests-clar/resources/submod2/sm_changed_index/file_to_modify
new file mode 100644
index 0000000..a02d317
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_index/file_to_modify
@@ -0,0 +1,4 @@
+This is a file to modify in submodules
+It already has some history.
+You can add local changes as needed.
+Here the file is changed in the index and the workdir
diff --git a/tests-clar/resources/submod2/sm_changed_untracked_file/.gitted b/tests-clar/resources/submod2/sm_changed_untracked_file/.gitted
new file mode 100644
index 0000000..9a10706
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_untracked_file/.gitted
@@ -0,0 +1 @@
+gitdir: ../.git/modules/sm_changed_untracked_file
diff --git a/tests-clar/resources/submod2/sm_changed_untracked_file/README.txt b/tests-clar/resources/submod2/sm_changed_untracked_file/README.txt
new file mode 100644
index 0000000..780d739
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_untracked_file/README.txt
@@ -0,0 +1,3 @@
+This is the target for submod2 submodule links.
+Don't add commits casually because you make break tests.
+
diff --git a/tests-clar/resources/submod2/sm_changed_untracked_file/file_to_modify b/tests-clar/resources/submod2/sm_changed_untracked_file/file_to_modify
new file mode 100644
index 0000000..789efbd
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_untracked_file/file_to_modify
@@ -0,0 +1,3 @@
+This is a file to modify in submodules
+It already has some history.
+You can add local changes as needed.
diff --git a/tests-clar/resources/submod2/sm_changed_untracked_file/i_am_untracked b/tests-clar/resources/submod2/sm_changed_untracked_file/i_am_untracked
new file mode 100644
index 0000000..d2bae61
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_changed_untracked_file/i_am_untracked
@@ -0,0 +1 @@
+This file is untracked, but in a submodule
diff --git a/tests-clar/resources/submod2/sm_missing_commits/.gitted b/tests-clar/resources/submod2/sm_missing_commits/.gitted
new file mode 100644
index 0000000..70193be
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_missing_commits/.gitted
@@ -0,0 +1 @@
+gitdir: ../.git/modules/sm_missing_commits
diff --git a/tests-clar/resources/submod2/sm_missing_commits/README.txt b/tests-clar/resources/submod2/sm_missing_commits/README.txt
new file mode 100644
index 0000000..780d739
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_missing_commits/README.txt
@@ -0,0 +1,3 @@
+This is the target for submod2 submodule links.
+Don't add commits casually because you make break tests.
+
diff --git a/tests-clar/resources/submod2/sm_missing_commits/file_to_modify b/tests-clar/resources/submod2/sm_missing_commits/file_to_modify
new file mode 100644
index 0000000..8834b63
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_missing_commits/file_to_modify
@@ -0,0 +1,3 @@
+This is a file to modify in submodules
+It already has some history.
+
diff --git a/tests-clar/resources/submod2/sm_unchanged/.gitted b/tests-clar/resources/submod2/sm_unchanged/.gitted
new file mode 100644
index 0000000..51a679c
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_unchanged/.gitted
@@ -0,0 +1 @@
+gitdir: ../.git/modules/sm_unchanged
diff --git a/tests-clar/resources/submod2/sm_unchanged/README.txt b/tests-clar/resources/submod2/sm_unchanged/README.txt
new file mode 100644
index 0000000..780d739
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_unchanged/README.txt
@@ -0,0 +1,3 @@
+This is the target for submod2 submodule links.
+Don't add commits casually because you make break tests.
+
diff --git a/tests-clar/resources/submod2/sm_unchanged/file_to_modify b/tests-clar/resources/submod2/sm_unchanged/file_to_modify
new file mode 100644
index 0000000..789efbd
--- /dev/null
+++ b/tests-clar/resources/submod2/sm_unchanged/file_to_modify
@@ -0,0 +1,3 @@
+This is a file to modify in submodules
+It already has some history.
+You can add local changes as needed.
diff --git a/tests-clar/resources/submod2_target/.gitted/HEAD b/tests-clar/resources/submod2_target/.gitted/HEAD
new file mode 100644
index 0000000..cb089cd
--- /dev/null
+++ b/tests-clar/resources/submod2_target/.gitted/HEAD
@@ -0,0 +1 @@
+ref: refs/heads/master
diff --git a/tests-clar/resources/submod2_target/.gitted/config b/tests-clar/resources/submod2_target/.gitted/config
new file mode 100644
index 0000000..af10792
--- /dev/null
+++ b/tests-clar/resources/submod2_target/.gitted/config
@@ -0,0 +1,6 @@
+[core]
+	repositoryformatversion = 0
+	filemode = true
+	bare = false
+	logallrefupdates = true
+	ignorecase = true
diff --git a/tests-clar/resources/submod2_target/.gitted/description b/tests-clar/resources/submod2_target/.gitted/description
new file mode 100644
index 0000000..498b267
--- /dev/null
+++ b/tests-clar/resources/submod2_target/.gitted/description
@@ -0,0 +1 @@
+Unnamed repository; edit this file 'description' to name the repository.
diff --git a/tests-clar/resources/submod2_target/.gitted/hooks/applypatch-msg.sample b/tests-clar/resources/submod2_target/.gitted/hooks/applypatch-msg.sample
new file mode 100755
index 0000000..8b2a2fe
--- /dev/null
+++ b/tests-clar/resources/submod2_target/.gitted/hooks/applypatch-msg.sample
@@ -0,0 +1,15 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message taken by
+# applypatch from an e-mail message.
+#
+# The hook should exit with non-zero status after issuing an
+# appropriate message if it wants to stop the commit.  The hook is
+# allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "applypatch-msg".
+
+. git-sh-setup
+test -x "$GIT_DIR/hooks/commit-msg" &&
+	exec "$GIT_DIR/hooks/commit-msg" ${1+"$@"}
+:
diff --git a/tests-clar/resources/submod2_target/.gitted/index b/tests-clar/resources/submod2_target/.gitted/index
new file mode 100644
index 0000000..eb3ff8c
Binary files /dev/null and b/tests-clar/resources/submod2_target/.gitted/index differ
diff --git a/tests-clar/resources/submod2_target/.gitted/info/exclude b/tests-clar/resources/submod2_target/.gitted/info/exclude
new file mode 100644
index 0000000..a5196d1
--- /dev/null
+++ b/tests-clar/resources/submod2_target/.gitted/info/exclude
@@ -0,0 +1,6 @@
+# git ls-files --others --exclude-from=.git/info/exclude
+# Lines that start with '#' are comments.
+# For a project mostly in C, the following would be a good set of
+# exclude patterns (uncomment them if you want to use them):
+# *.[oa]
+# *~
diff --git a/tests-clar/resources/submod2_target/.gitted/logs/HEAD b/tests-clar/resources/submod2_target/.gitted/logs/HEAD
new file mode 100644
index 0000000..0ecd111
--- /dev/null
+++ b/tests-clar/resources/submod2_target/.gitted/logs/HEAD
@@ -0,0 +1,4 @@
+0000000000000000000000000000000000000000 6b31c659545507c381e9cd34ec508f16c04e149e Russell Belfer <rb@github.com> 1342559662 -0700	commit (initial): Initial commit
+6b31c659545507c381e9cd34ec508f16c04e149e 41bd4bc3df978de695f67ace64c560913da11653 Russell Belfer <rb@github.com> 1342559709 -0700	commit: Adding test file
+41bd4bc3df978de695f67ace64c560913da11653 5e4963595a9774b90524d35a807169049de8ccad Russell Belfer <rb@github.com> 1342559726 -0700	commit: Updating test file
+5e4963595a9774b90524d35a807169049de8ccad 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342559925 -0700	commit: One more update
diff --git a/tests-clar/resources/submod2_target/.gitted/logs/refs/heads/master b/tests-clar/resources/submod2_target/.gitted/logs/refs/heads/master
new file mode 100644
index 0000000..0ecd111
--- /dev/null
+++ b/tests-clar/resources/submod2_target/.gitted/logs/refs/heads/master
@@ -0,0 +1,4 @@
+0000000000000000000000000000000000000000 6b31c659545507c381e9cd34ec508f16c04e149e Russell Belfer <rb@github.com> 1342559662 -0700	commit (initial): Initial commit
+6b31c659545507c381e9cd34ec508f16c04e149e 41bd4bc3df978de695f67ace64c560913da11653 Russell Belfer <rb@github.com> 1342559709 -0700	commit: Adding test file
+41bd4bc3df978de695f67ace64c560913da11653 5e4963595a9774b90524d35a807169049de8ccad Russell Belfer <rb@github.com> 1342559726 -0700	commit: Updating test file
+5e4963595a9774b90524d35a807169049de8ccad 480095882d281ed676fe5b863569520e54a7d5c0 Russell Belfer <rb@github.com> 1342559925 -0700	commit: One more update
diff --git a/tests-clar/resources/submod2_target/.gitted/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1 b/tests-clar/resources/submod2_target/.gitted/objects/06/362fe2fdb7010d0e447b4fb450d405420479a1
new file mode 100644
index 0000000..f4b7094
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diff --git a/tests-clar/resources/submod2_target/.gitted/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484 b/tests-clar/resources/submod2_target/.gitted/objects/0e/6a3ca48bd47cfe67681acf39aa0b10a0b92484
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diff --git a/tests-clar/resources/submod2_target/README.txt b/tests-clar/resources/submod2_target/README.txt
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index 0000000..780d739
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+++ b/tests-clar/resources/submod2_target/README.txt
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+This is the target for submod2 submodule links.
+Don't add commits casually because you make break tests.
+
diff --git a/tests-clar/resources/submod2_target/file_to_modify b/tests-clar/resources/submod2_target/file_to_modify
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index 0000000..789efbd
--- /dev/null
+++ b/tests-clar/resources/submod2_target/file_to_modify
@@ -0,0 +1,3 @@
+This is a file to modify in submodules
+It already has some history.
+You can add local changes as needed.